Publications

This page contains the top three of my most recent papers. You can find the complete publication list on my Google Scholar profile.

AlphaFind v2: Similarity Search in AlphaFold DB and TED Domains across Structural Contexts

Published in Preprint (BioRxiv), 2026

Gromacs MetaDump: a tool for extracting GROMACS simulation metadata

Published in Journal of Chemoinformatics, 2025

AlphaFind: discover structure similarity across the proteome in AlphaFold DB

Published in Nucleic Acids Research, 2024